C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ras-related C3 botulinum toxin substrate 3b (rho family, small GTP binding protein Rac3)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000122905 rac3b-001 ENSDARG00000020795 7955 + 12:3614629-3633776 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000122905
Transcript ID Brain Heart Kidney Muscle
ENSDART00000122905 68.162±13.15 0.495±0.17 0.920±0.05 1.152±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00043Y CIL_00043Y_0001 CGP 12:3614629-3645629

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003924 IEA GTPase activity
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0006184 IEA GTP catabolic process
GO:0007165 IEA signal transduction
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000024956 Rhoq-001 protein_coding Mus_musculus 0.0000000000003 82
ENSMUST00000139344 Rhoq-002 protein_coding Mus_musculus 0.00000000000004 82
ENST00000238738 RHOQ-001 protein_coding Homo_sapiens 0.0000000005 71
ENST00000432183 RHOQ-003 nonsense_mediated_decay Homo_sapiens 0.0000000001 71
ENST00000437982 RHOQP3-001 processed_pseudogene Homo_sapiens 0.0000000001 71
ENST00000555758 RHOQP1-001 processed_pseudogene Homo_sapiens 0.000000005 66
ENST00000616091 RHOQ-201 protein_coding Homo_sapiens 0.0000000001 71

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