C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: autophagy related 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000139548 Atg13-006 ENSMUSG00000027244 10090 - 2:91676283-91679695 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000139548
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000139548 32.458±0.00 17.346±0.00 18.528±4.16 15.264±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000182 CIL_000182_0002 CGP 2:91649860-91710576
CIL_000181 CIL_000181_0002 CGP 2:91674618-91721545

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000359513 ATG13-006 protein_coding Homo_sapiens 0 475
ENST00000524625 ATG13-001 protein_coding Homo_sapiens 0 475
ENST00000525009 ATG13-018 protein_coding Homo_sapiens 0 195
ENST00000526508 ATG13-004 protein_coding Homo_sapiens 0 475
ENST00000528494 ATG13-008 protein_coding Homo_sapiens 0 475
ENST00000529395 ATG13-019 nonsense_mediated_decay Homo_sapiens 0 309
ENST00000529655 ATG13-003 protein_coding Homo_sapiens 0 475
ENST00000530500 ATG13-005 protein_coding Homo_sapiens 0 475
ENST00000531933 ATG13-017 protein_coding Homo_sapiens 9.99995e-41 171
ENST00000532067 ATG13-020 nonsense_mediated_decay Homo_sapiens 5e-21 104
ENST00000533316 ATG13-016 retained_intron Homo_sapiens 3e-21 106

Loading