C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: autophagy related 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000526508 ATG13-004 ENSG00000175224 9606 + 11:46617563-46674520 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonKidneyMuscleOvaryTestisENST00000526508
Transcript ID Bladder Brain Colon Kidney Muscle Ovary Testis
ENST00000526508 0.541±0.00 4.590±2.42 1.175±0.68 0.568±0.00 1.985±0.00 2.280±0.45 7.034±1.62

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000045 IMP autophagic vacuole assembly
GO:0000407 ISS pre-autophagosomal structure
GO:0005515 IPI protein binding
GO:0005829 IBA cytosol
GO:0019901 IPI protein kinase binding
GO:0034273 IBA ATG1/UKL1 signaling complex
GO:0070969 IPI ULK1-ATG13-FIP200 complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028678 Atg13-001 protein_coding Mus_musculus 0 2061
ENSMUST00000076803 Atg13-002 protein_coding Mus_musculus 0 1035
ENSMUST00000153631 Atg13-004 processed_transcript Mus_musculus 0 525
ENSMUST00000139548 Atg13-006 processed_transcript Mus_musculus 0 475
ENSMUST00000126000 Atg13-005 processed_transcript Mus_musculus 0 464
ENSMUST00000136412 Atg13-003 processed_transcript Mus_musculus 0 300

Loading