C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: beclin 1, autophagy related
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000139669 Becn1-006 ENSMUSG00000035086 10090 - 11:101298077-101302255 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalOvaryENSMUST00000139669
Transcript ID Adrenal Ovary
ENSMUST00000139669 33.351±6.94 42.200±11.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005SB CIL_0005SB_0002 CGP 11:101277968-101296317
CIL_0005S8 CIL_0005S8_0002 CGP 11:101279012-101302286
CIL_0005S9 CIL_0005S9_0002 CGP 11:101285952-101323537

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000361523 BECN1-002 protein_coding Homo_sapiens 0 335
ENST00000438274 BECN1-003 protein_coding Homo_sapiens 0 435
ENST00000543382 BECN1-004 retained_intron Homo_sapiens 0 435
ENST00000585515 BECN1-011 retained_intron Homo_sapiens 0 350
ENST00000589636 BECN1-008 protein_coding Homo_sapiens 0 272
ENST00000590099 BECN1-001 protein_coding Homo_sapiens 0 420
ENST00000591085 BECN1-010 nonsense_mediated_decay Homo_sapiens 0 313
ENST00000591307 BECN1-007 retained_intron Homo_sapiens 0 327
ENST00000593112 BECN1-006 retained_intron Homo_sapiens 0 418
ENST00000593205 BECN1-012 protein_coding Homo_sapiens 0 409
ENST00000612631 BECN1-009 protein_coding Homo_sapiens 0 206
ENST00000617806 BECN1-005 retained_intron Homo_sapiens 0 435

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