C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0005S8_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000176563-ENSG00000126581 | CGP | 9606 | 17:42798792-42833350  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000126581  (BECN1)beclin 1, autophagy related |
ENST00000361523 (BECN1-002)
|
42810134-42824263 | protein_coding | |
|
ENST00000438274 (BECN1-003)
|
42810308-42824287 | protein_coding | ||
|
ENST00000543382 (BECN1-004)
|
42810414-42824287 | retained_intron | ||
|
ENST00000585515 (BECN1-011)
|
42819324-42824282 | retained_intron | ||
|
ENST00000586589 (BECN1-019)
|
42810860-42818652 | protein_coding | ||
|
ENST00000586754 (BECN1-013)
|
42811724-42815995 | processed_transcript | ||
|
ENST00000587880 (BECN1-020)
|
42810716-42813989 | nonsense_mediated_decay | ||
|
ENST00000588276 (BECN1-021)
|
42810310-42814673 | protein_coding | ||
|
ENST00000589492 (BECN1-016)
|
42813903-42815014 | retained_intron | ||
|
ENST00000589493 (BECN1-014)
|
42815670-42818682 | retained_intron | ||
|
ENST00000589636 (BECN1-008)
|
42820794-42833350 | protein_coding | ||
|
ENST00000589663 (BECN1-017)
|
42810670-42818578 | protein_coding | ||
|
ENST00000590099 (BECN1-001)
|
42810137-42824263 | protein_coding | ||
|
ENST00000590185 (BECN1-022)
|
42810780-42812086 | retained_intron | ||
|
ENST00000590764 (BECN1-018)
|
42810288-42814593 | protein_coding | ||
|
ENST00000590852 (BECN1-015)
|
42814168-42815971 | protein_coding | ||
|
ENST00000591085 (BECN1-010)
|
42818651-42824287 | nonsense_mediated_decay | ||
|
ENST00000591307 (BECN1-007)
|
42820351-42824253 | retained_intron | ||
|
ENST00000593112 (BECN1-006)
|
42820523-42824260 | retained_intron | ||
|
ENST00000593205 (BECN1-012)
|
42814599-42824251 | protein_coding | ||
|
ENST00000612631 (BECN1-009)
|
42823818-42833332 | protein_coding | ||
|
ENST00000617806 (BECN1-005)
|
42810134-42824278 | retained_intron | ||
|
ENSG00000131467 (PSME3) proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki) |
ENST00000293362 (PSME3-002)
|
42833471-42843757 | protein_coding | |
|
ENST00000441946 (PSME3-004)
|
42833418-42843216 | protein_coding | ||
|
ENST00000541124 (PSME3-201)
|
42833142-42843758 | protein_coding | ||
|
ENST00000543428 (PSME3-005)
|
42833445-42841695 | nonsense_mediated_decay | ||
|
ENST00000545225 (PSME3-006)
|
42824426-42843239 | protein_coding | ||
|
ENST00000585805 (PSME3-003)
|
42833411-42838798 | protein_coding | ||
|
ENST00000586114 (PSME3-015)
|
42833399-42838985 | protein_coding | ||
|
ENST00000586312 (PSME3-008)
|
42833549-42838976 | nonsense_mediated_decay | ||
|
ENST00000589469 (PSME3-013)
|
42833437-42839303 | protein_coding | ||
|
ENST00000590720 (PSME3-001)
|
42833399-42841578 | protein_coding | ||
|
ENST00000591152 (PSME3-009)
|
42833419-42839009 | protein_coding | ||
|
ENST00000591722 (PSME3-011)
|
42833445-42837755 | retained_intron | ||
|
ENST00000592169 (PSME3-012)
|
42833496-42841671 | protein_coding | ||
|
ENST00000592458 (PSME3-007)
|
42824385-42833026 | processed_transcript | ||
|
ENST00000592578 (PSME3-010)
|
42833418-42834804 | processed_transcript | ||
|
ENST00000593111 (PSME3-014)
|
42834542-42839124 | retained_intron | ||
|
ENST00000622892 (PSME3-202)
|
42833142-42843758 | protein_coding | ||
|
ENSG00000278447 (MIR6781) microRNA 6781 |
ENST00000621616 (MIR6781-201)
|
42823880-42823943 | miRNA | |
| CIL_0005S8_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000078653-ENSMUSG00000035086 | CGP | 10090 | 11:101279012-101302286 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000017188 (Coa3) cytochrome C oxidase assembly factor 3 |
ENSMUST00000017332 (Coa3-001)
|
101277968-101279114 | protein_coding | |
|
ENSMUST00000168089 (Coa3-002)
|
101278338-101278943 | protein_coding | ||
|
ENSMUSG00000035086 (Becn1) beclin 1, autophagy related |
ENSMUST00000041403 (Becn1-002)
|
101288262-101302286 | nonsense_mediated_decay | |
|
ENSMUST00000122817 (Becn1-003)
|
101288262-101302260 | retained_intron | ||
|
ENSMUST00000126195 (Becn1-011)
|
101291383-101296307 | nonsense_mediated_decay | ||
|
ENSMUST00000129863 (Becn1-012)
|
101290484-101301737 | protein_coding | ||
|
ENSMUST00000130916 (Becn1-001)
|
101285952-101302286 | protein_coding | ||
|
ENSMUST00000135805 (Becn1-007)
|
101289880-101292498 | processed_transcript | ||
|
ENSMUST00000136535 (Becn1-008)
|
101288888-101294041 | retained_intron | ||
|
ENSMUST00000137614 (Becn1-009)
|
101301461-101302241 | retained_intron | ||
|
ENSMUST00000139669 (Becn1-006)
|
101298077-101302255 | processed_transcript | ||
|
ENSMUST00000139997 (Becn1-004)
|
101288262-101302252 | retained_intron | ||
|
ENSMUST00000140286 (Becn1-010)
|
101291530-101295436 | retained_intron | ||
|
ENSMUST00000140706 (Becn1-005)
|
101295547-101302206 | protein_coding | ||
|
ENSMUST00000164036 (Becn1-016)
|
101296226-101302240 | retained_intron | ||
|
ENSMUST00000167667 (Becn1-014)
|
101288876-101302237 | nonsense_mediated_decay | ||
|
ENSMUST00000167818 (Becn1-017)
|
101291499-101302238 | nonsense_mediated_decay | ||
|
ENSMUST00000170502 (Becn1-013)
|
101295907-101302249 | protein_coding | ||
|
ENSMUST00000172233 (Becn1-015)
|
101288418-101302251 | protein_coding | ||
|
ENSMUSG00000078653 (Cntd1) cyclin N-terminal domain containing 1 |
ENSMUST00000103107 (Cntd1-001)
|
101279096-101288701 | protein_coding | |
|
ENSMUST00000128735 (Cntd1-002)
|
101279012-101286545 | processed_transcript | ||
|
ENSMUST00000153438 (Cntd1-003)
|
101286055-101296317 | processed_transcript | ||
Expression Patterns
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