C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cDNA sequence BC030867
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000140040 BC030867-003 ENSMUSG00000034773 10090 + 11:102261964-102265187 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000140040
Transcript ID Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000140040 0.331±0.15 0.351±0.03 0.799±0.16 0.136±0.03 0.187±0.07 0.141±0.09 0.219±0.04 0.087±0.00 1.533±0.42 1.641±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B6 CIL_0009B6_0002 VISTA 11:102063033-102664797
CIL_0005J4 CIL_0005J4_0002 CGP 11:102194432-102265187
CIL_0005J3 CIL_0005J3_0002 CGP 11:102248882-102279462

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000245382 C17orf53-003 protein_coding Homo_sapiens 4e-20 104
ENST00000319977 C17orf53-002 protein_coding Homo_sapiens 2e-33 148
ENST00000585683 C17orf53-001 protein_coding Homo_sapiens 2e-33 148
ENST00000588073 C17orf53-005 retained_intron Homo_sapiens 6e-34 148

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