C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 31
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000140178 Rnf31-005 ENSMUSG00000047098 10090 + 14:55592275-55603664 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryTestisENSMUST00000140178
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Testis
ENSMUST00000140178 6.328±1.03 9.526±2.19 4.361±1.30 9.765±1.41 10.849±3.00 3.873±0.54 5.990±1.11 4.248±1.24 8.256±0.89 13.045±1.68 2.620±0.52

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00031B CIL_00031B_0002 CGP 14:55587441-55603693
CIL_00023F CIL_00023F_0002 CGP 14:55591708-55610030

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000324103 RNF31-001 protein_coding Homo_sapiens 0 1914
ENST00000483895 RNF31-003 nonsense_mediated_decay Homo_sapiens 0 536
ENST00000491351 RNF31-002 nonsense_mediated_decay Homo_sapiens 0 1496
ENST00000557878 RNF31-009 processed_transcript Homo_sapiens 0 344
ENST00000557991 RNF31-011 protein_coding Homo_sapiens 0 248
ENST00000558452 RNF31-020 retained_intron Homo_sapiens 0 398
ENST00000558468 IRF9-001 nonsense_mediated_decay Homo_sapiens 0 1914
ENST00000558634 RNF31-008 processed_transcript Homo_sapiens 0 270
ENST00000558907 RNF31-018 nonsense_mediated_decay Homo_sapiens 0 344
ENST00000559071 RNF31-006 retained_intron Homo_sapiens 0 1914
ENST00000559260 RNF31-015 protein_coding Homo_sapiens 0 363
ENST00000559275 RNF31-004 protein_coding Homo_sapiens 0 1914
ENST00000559308 RNF31-026 protein_coding Homo_sapiens 0 435
ENST00000559438 RNF31-013 processed_transcript Homo_sapiens 0 344
ENST00000559449 RNF31-022 nonsense_mediated_decay Homo_sapiens 0 824
ENST00000559533 RNF31-010 protein_coding Homo_sapiens 0 628
ENST00000559583 RNF31-017 processed_transcript Homo_sapiens 0 403
ENST00000559719 RNF31-021 protein_coding Homo_sapiens 0 462
ENST00000560071 RNF31-014 protein_coding Homo_sapiens 0 446
ENST00000560342 RNF31-016 retained_intron Homo_sapiens 0 344
ENST00000560754 RNF31-019 protein_coding Homo_sapiens 0 542
ENST00000560787 RNF31-005 protein_coding Homo_sapiens 0 2966

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