C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ring finger protein 31
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000560787 RNF31-005 ENSG00000092098 9606 + 14:24148082-24160654 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000560787
Transcript ID Muscle
ENST00000560787 11.202±6.96

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001K8 CIL_0001K8_0002 CGP 14:24138959-24147570
CIL_00031B CIL_00031B_0001 CGP 14:24143362-24160661

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0005515 IEA protein binding
GO:0008270 IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0071797 IEA LUBAC complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000140178 Rnf31-005 protein_coding Mus_musculus 0 2966
ENSMUST00000019443 Rnf31-001 protein_coding Mus_musculus 0 1910
ENSMUST00000137296 Rnf31-002 nonsense_mediated_decay Mus_musculus 0 1048
ENSMUST00000133903 Rnf31-004 retained_intron Mus_musculus 0 278

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