C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cerebellar degeneration-related 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000140247 Cdr2-002 ENSMUSG00000030878 10090 - 7:120957036-120981790 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleOvaryPlacentaENSMUST00000140247
Transcript ID Muscle Ovary Placenta
ENSMUST00000140247 0.693±0.19 3.847±0.93 3.135±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006GX CIL_0006GX_0002 CGP 7:120917744-120982312
CIL_0008RG CIL_0008RG_0002 VISTA 7:120952178-121553246
CIL_0005WA CIL_0005WA_0002 CGP 7:120957036-121014787

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000268383 CDR2-001 protein_coding Homo_sapiens 0 1363
ENST00000561630 CDR2-003 nonsense_mediated_decay Homo_sapiens 0 518
ENST00000563573 CDR2-005 protein_coding Homo_sapiens 0 276
ENST00000564542 CDR2-007 protein_coding Homo_sapiens 0 861
ENST00000567010 CDR2-004 protein_coding Homo_sapiens 0 279
ENST00000567406 CDR2-002 protein_coding Homo_sapiens 0 427

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