C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cerebellar degeneration-related 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030878 Cdr2 10090 - 7:120957036-120982312 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000033169 Cdr2-001 120957036-120982312 protein_coding
  ENSMUST00000140247 Cdr2-002 120957036-120981790 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000033169ENSMUST00000140247
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000033169 20.298±5.08 9.661±2.82 15.764±1.82 8.416±2.78 8.966±1.05 9.903±2.33 4.783±1.14 16.618±1.02 32.985±36.16 11.468±2.07 0.947±0.13 9.574±4.67 17.452±4.99 17.820±1.39
ENSMUST00000140247 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.693±0.19 3.847±0.93 3.135±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006GX CIL_0006GX_0002 CGP 7:120917744-120982312
CIL_0008RG CIL_0008RG_0002 VISTA 7:120952178-121553246
CIL_0005WA CIL_0005WA_0002 CGP 7:120957036-121014787

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005737 IDA cytoplasm
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000035952 cdr2a cerebellar degeneration-related protein 2a protein_coding Danio_rerio
ENSDARG00000037359 CDR2 (2 of 2) cerebellar degeneration-related protein 2, 62kDa protein_coding Danio_rerio
ENSG00000140743 CDR2 cerebellar degeneration-related protein 2, 62kDa protein_coding Homo_sapiens

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