C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000140299 Tmem5-001 ENSMUSG00000034620 10090 - 10:122078114-122097371 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000140299
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000140299 1.211±0.33 5.513±1.09 0.850±0.26 0.705±0.12 1.207±0.55 1.853±0.28 0.406±0.12 0.719±0.43 0.527±0.17 1.763±0.33 0.591±0.15 2.412±1.68 0.902±0.17 0.235±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006YB CIL_0006YB_0002 CGP 10:121780991-122097371

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261234 TMEM5-001 protein_coding Homo_sapiens 0 1428
ENST00000262225 TMED2-001 protein_coding Homo_sapiens 0 412
ENST00000509052 TMED2-004 protein_coding Homo_sapiens 0 366
ENST00000536219 TMEM5-006 retained_intron Homo_sapiens 0 422
ENST00000537373 TMEM5-003 protein_coding Homo_sapiens 0 1284
ENST00000537982 TMEM5-007 processed_transcript Homo_sapiens 0 244
ENST00000543342 TMEM5-002 nonsense_mediated_decay Homo_sapiens 0 1114
ENST00000543425 TMED2-006 retained_intron Homo_sapiens 0 647

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