C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Ssu72 RNA polymerase II CTD phosphatase homolog (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000140322 Ssu72-003 ENSMUSG00000029038 10090 + 4:155705124-155716678 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryENSMUST00000140322
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary
ENSMUST00000140322 8.731±0.61 13.917±0.00 5.904±0.00 7.117±2.08 8.715±0.00 2.750±0.50 4.617±1.01 4.836±0.61 10.453±0.46 1.544±0.05 8.561±2.94

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000291386 SSU72-001 protein_coding Homo_sapiens 0 322
ENST00000359060 SSU72-003 protein_coding Homo_sapiens 0 324
ENST00000378725 SSU72-004 retained_intron Homo_sapiens 0 313
ENST00000473520 SSU72P8-001 processed_pseudogene Homo_sapiens 0.000000000000001 88
ENST00000524542 SSU72P2-001 processed_pseudogene Homo_sapiens 2e-22 110
ENST00000530088 SSU72P4-001 processed_pseudogene Homo_sapiens 1e-19 100
ENST00000531780 SSU72P3-001 processed_pseudogene Homo_sapiens 6e-23 111
ENST00000532284 SSU72P7-001 processed_pseudogene Homo_sapiens 1e-19 100
ENST00000532495 SSU72P5-001 processed_pseudogene Homo_sapiens 3e-21 106
ENST00000532644 SSU72P6-001 processed_pseudogene Homo_sapiens 1e-19 100

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