C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial ribosomal protein S25
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000140438 Mrps25-001 ENSMUSG00000014551 10090 - 6:92169525-92184033 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000140438
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000140438 6.872±1.03 3.258±0.38 8.669±0.64 11.353±5.14 5.890±1.16 4.744±0.50 5.572±0.39 6.407±0.54 5.059±2.60 6.607±0.47 4.716±0.27 5.209±1.49 3.699±1.66 5.821±2.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005AG CIL_0005AG_0002 CGP 6:91978878-92173057
CIL_0005AF CIL_0005AF_0002 CGP 6:92091390-92184033
CIL_0005AI CIL_0005AI_0002 CGP 6:92169525-92214925

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 ISA structural constituent of ribosome
GO:0005739 IDA mitochondrion
GO:0005763 ISS mitochondrial small ribosomal subunit
GO:0032543 IC mitochondrial translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000253686 MRPS25-001 protein_coding Homo_sapiens 0 558
ENST00000420267 MRPS25-004 nonsense_mediated_decay Homo_sapiens 0 375
ENST00000444840 MRPS25-002 protein_coding Homo_sapiens 0 268
ENST00000447299 MRPS25-005 nonsense_mediated_decay Homo_sapiens 0 375
ENST00000449354 MRPS25-003 protein_coding Homo_sapiens 0 375
ENST00000617312 NR2C2-202 protein_coding Homo_sapiens 0 379

Loading