C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005AI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000131368-ENSG00000131381 CGP 9606 3:15042460-15099163
GeneTranscriptPositionBiotype
ENSG00000131368 (MRPS25)
mitochondrial ribosomal protein S25 		ENST00000253686 (MRPS25-001) 15048518-15065335 protein_coding
ENST00000420267 (MRPS25-004) 15049881-15065311 nonsense_mediated_decay
ENST00000444840 (MRPS25-002) 15051717-15065317 protein_coding
ENST00000447299 (MRPS25-005) 15052435-15065300 nonsense_mediated_decay
ENST00000449354 (MRPS25-003) 15049212-15065260 protein_coding
ENST00000474866 (MRPS25-007) 15045099-15050102 processed_transcript
ENST00000496484 (MRPS25-006) 15042460-15049967 processed_transcript
ENSG00000131381 (ZFYVE20)
zinc finger, FYVE domain containing 20 		ENST00000253699 (ZFYVE20-001) 15070073-15099148 protein_coding
ENST00000426541 (ZFYVE20-008) 15074905-15082440 nonsense_mediated_decay
ENST00000441057 (ZFYVE20-006) 15084735-15099133 nonsense_mediated_decay
ENST00000449050 (ZFYVE20-005) 15095671-15099143 protein_coding
ENST00000449964 (ZFYVE20-004) 15078157-15099148 processed_transcript
ENST00000463214 (ZFYVE20-007) 15082478-15086112 retained_intron
ENST00000476527 (ZFYVE20-002) 15073605-15099163 protein_coding
ENST00000483098 (ZFYVE20-009) 15078110-15081560 processed_transcript
ENST00000507357 (ZFYVE20-010) 15095998-15099136 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_0005AI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000014551-ENSMUSG00000014550 CGP 10090 6:92169525-92214925
GeneTranscriptPositionBiotype
ENSMUSG00000005893 (Nr2c2)
nuclear receptor subfamily 2, group C, member 2 		ENSMUST00000113460 (Nr2c2-001) 92091390-92173057 protein_coding
ENSMUST00000113463 (Nr2c2-002) 92092433-92167705 protein_coding
ENSMUST00000133133 (Nr2c2-005) 92138015-92139832 processed_transcript
ENSMUST00000133321 (Nr2c2-004) 92145727-92156610 processed_transcript
ENSMUST00000146175 (Nr2c2-003) 92139796-92168668 nonsense_mediated_decay
ENSMUSG00000014550 (Zfyve20)
zinc finger, FYVE domain containing 20 		ENSMUST00000014694 (Zfyve20-001) 92186712-92214925 protein_coding
ENSMUST00000124635 (Zfyve20-004) 92189841-92199725 processed_transcript
ENSMUST00000138041 (Zfyve20-002) 92211596-92214569 protein_coding
ENSMUST00000141332 (Zfyve20-003) 92190383-92201628 processed_transcript
ENSMUSG00000014551 (Mrps25)
mitochondrial ribosomal protein S25 		ENSMUST00000014695 (Mrps25-003) 92174838-92175902 processed_transcript
ENSMUST00000134132 (Mrps25-002) 92178313-92183971 retained_intron
ENSMUST00000140438 (Mrps25-001) 92169525-92184033 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005AI_0001ENSG00000131368ENST00000253686ENST00000420267ENST00000444840ENST00000447299ENST00000449354ENST00000474866ENST00000496484ENSG00000131381ENST00000253699ENST00000426541ENST00000441057ENST00000449050ENST00000449964ENST00000463214ENST00000476527ENST00000483098ENST00000507357CIL_0005AI_0002ENSMUSG00000005893ENSMUST00000113460ENSMUST00000113463ENSMUST00000133133ENSMUST00000133321ENSMUST00000146175ENSMUSG00000014550ENSMUST00000014694ENSMUST00000124635ENSMUST00000138041ENSMUST00000141332ENSMUSG00000014551ENSMUST00000014695ENSMUST00000134132ENSMUST00000140438
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005AI_0001ENSG00000131368ENST00000253686ENSG00000131381ENST00000253699ENST00000426541ENST00000476527CIL_0005AI_0002ENSMUSG00000005893ENSMUST00000113460ENSMUST00000113463ENSMUST00000146175ENSMUSG00000014550ENSMUST00000014694ENSMUST00000124635ENSMUSG00000014551ENSMUST00000014695ENSMUST00000134132ENSMUST00000140438
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000131368 ENST00000253686 N/A 7.883±0.00 N/A 7.786±0.00 N/A 5.503±1.59 5.602±3.27 6.834±4.43 3.389±0.00 N/A 2.406±0.00 9.479±2.50 5.656±0.00 12.039±3.15
ENST00000420267 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000444840 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000447299 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000449354 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474866 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496484 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000131381 ENST00000253699 2.087±0.00 N/A 0.801±0.00 4.032±3.03 1.070±0.28 1.831±0.00 2.499±1.53 0.809±0.26 1.745±0.51 0.947±0.03 1.179±0.00 1.923±0.86 0.726±0.10 N/A
ENST00000426541 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.737±0.00 3.006±0.00 N/A N/A
ENST00000441057 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000449050 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000449964 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463214 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476527 N/A N/A N/A N/A 1.368±0.00 N/A 0.773±0.00 N/A 2.299±0.00 2.074±0.00 0.545±0.00 N/A N/A N/A
ENST00000483098 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507357 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000005893 ENSMUST00000113460 1.420±0.00 3.208±0.95 1.666±0.03 2.574±0.41 2.112±0.18 1.600±0.40 N/A 1.367±0.08 1.310±0.65 1.501±0.06 1.180±0.22 2.298±0.47 0.923±0.23 0.930±0.00
ENSMUST00000113463 4.368±0.92 3.968±0.74 N/A 11.207±0.00 3.368±0.00 N/A N/A 4.082±0.11 1.703±0.00 3.476±0.00 N/A 5.506±1.16 N/A 5.443±1.22
ENSMUST00000133133 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133321 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146175 8.701±2.43 5.651±2.88 3.364±0.12 7.373±1.82 9.252±2.12 7.226±1.23 4.857±0.32 7.069±0.61 2.700±0.69 9.761±0.58 3.047±0.20 9.628±2.33 3.078±0.94 6.197±0.82
ENSMUSG00000014550 ENSMUST00000014694 6.335±1.50 3.731±1.93 5.277±0.10 8.465±1.10 5.517±0.90 4.490±1.71 3.518±0.18 4.472±1.28 3.046±1.27 6.037±2.26 4.019±0.39 7.726±2.32 5.666±1.23 2.468±0.34
ENSMUST00000124635 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.393±0.38 N/A N/A
ENSMUST00000138041 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141332 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000014551 ENSMUST00000014695 N/A N/A N/A 38.856±0.00 N/A N/A N/A N/A N/A N/A N/A 55.983±0.00 39.988±20.51 40.604±0.00
ENSMUST00000134132 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.308±0.00 N/A
ENSMUST00000140438 6.872±1.03 3.258±0.38 8.669±0.64 11.353±5.14 5.890±1.16 4.744±0.50 5.572±0.39 6.407±0.54 5.059±2.60 6.607±0.47 4.716±0.27 5.209±1.49 3.699±1.66 5.821±2.38

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