C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WD repeat, SAM and U-box domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000140475 Wdsub1-004 ENSMUSG00000026988 10090 - 2:59876667-59882586 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000140475
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000140475 15.048±1.70 16.986±5.05 11.544±0.00 3.813±0.00 17.990±3.03 15.341±1.31 8.459±0.68 11.505±4.20 2.639±1.04 18.856±3.05 27.672±3.16 3.587±0.35 6.473±1.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00083G CIL_00083G_0002 VISTA 2:59262344-59863132
CIL_0007X8 CIL_0007X8_0002 VISTA 2:59297936-59901449
CIL_0008PS CIL_0008PS_0002 VISTA 2:59368906-59972125
CIL_0008P7 CIL_0008P7_0002 VISTA 2:59528773-60129361
CIL_0005U3 CIL_0005U3_0002 CGP 2:59612042-59882591
CIL_0005U2 CIL_0005U2_0002 CGP 2:59852364-60209839

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000358147 WDSUB1-004 protein_coding Homo_sapiens 0 411
ENST00000359774 WDSUB1-001 protein_coding Homo_sapiens 0 411
ENST00000392796 WDSUB1-002 protein_coding Homo_sapiens 0 411
ENST00000409124 WDSUB1-003 protein_coding Homo_sapiens 0 411
ENST00000409990 WDSUB1-005 protein_coding Homo_sapiens 0 411

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