C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WD repeat, sterile alpha motif and U-box domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000359774 WDSUB1-001 ENSG00000196151 9606 - 2:159235793-159286799 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000359774
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000359774 1.833±0.00 0.269±0.00 1.548±0.83 2.754±0.00 1.242±0.00 4.142±0.00 0.823±0.13 1.570±0.00 0.237±0.00 3.940±0.96 0.872±0.00 1.964±0.70

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007X8 CIL_0007X8_0001 VISTA 2:158652559-159256392
CIL_0008PS CIL_0008PS_0001 VISTA 2:158729476-159332500
CIL_0008P7 CIL_0008P7_0001 VISTA 2:158911416-159511996
CIL_0005U3 CIL_0005U3_0001 CGP 2:158968634-159286799
CIL_0005U2 CIL_0005U2_0001 CGP 2:159235793-159616692

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0016567 IEA protein ubiquitination
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028368 Wdsub1-001 protein_coding Mus_musculus 0 1057
ENSMUST00000102751 Wdsub1-011 protein_coding Mus_musculus 0 935
ENSMUST00000128671 Wdsub1-005 protein_coding Mus_musculus 0 411
ENSMUST00000140475 Wdsub1-004 protein_coding Mus_musculus 0 411
ENSMUST00000131285 Wdsub1-006 processed_transcript Mus_musculus 9.80909e-45 185

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