C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TBC1 domain family, member 20
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000140482 Tbc1d20-002 ENSMUSG00000027465 10090 + 2:152293872-152313996 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonLiverLungOvaryENSMUST00000140482
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Liver Lung Ovary
ENSMUST00000140482 4.639±0.20 9.096±2.89 2.968±0.00 2.000±0.40 6.600±0.85 6.156±1.70 1.427±0.36 5.347±1.15 5.850±1.63

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00096R CIL_00096R_0002 VISTA 2:152099091-152699726

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000354200 TBC1D20-004 protein_coding Homo_sapiens 0 931
ENST00000461188 TBC1D20-001 processed_transcript Homo_sapiens 0 795
ENST00000461304 TBC1D20-002 nonsense_mediated_decay Homo_sapiens 0 931
ENST00000494633 TBC1D20-003 processed_transcript Homo_sapiens 0 946

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