C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SEC22 vesicle trafficking protein homolog A (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000141087 Sec22a-004 ENSMUSG00000034473 10090 - 16:35361045-35363847 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonHeartKidneyLiverLungOvaryPlacentaENSMUST00000141087
Transcript ID Adipose Bladder Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENSMUST00000141087 21.884±2.14 8.996±0.00 10.421±2.02 13.592±4.61 9.820±3.59 14.165±4.26 5.070±0.78 17.062±3.25 9.601±1.81 9.647±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008J4 CIL_0008J4_0002 VISTA 16:35298618-35902946

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000309934 SEC22A-002 protein_coding Homo_sapiens 0 252
ENST00000466519 SEC22A-005 protein_coding Homo_sapiens 0 252
ENST00000466950 SEC22A-007 nonsense_mediated_decay Homo_sapiens 0 270
ENST00000469649 PDIA5-008 nonsense_mediated_decay Homo_sapiens 0 250
ENST00000473494 SEC22A-003 protein_coding Homo_sapiens 0 252
ENST00000477063 SEC22A-008 processed_transcript Homo_sapiens 0 270
ENST00000480631 SEC22A-004 protein_coding Homo_sapiens 0 250
ENST00000481965 SEC22A-009 protein_coding Homo_sapiens 0 270
ENST00000487572 SEC22A-006 protein_coding Homo_sapiens 0 252
ENST00000491366 SEC22A-010 protein_coding Homo_sapiens 0 252
ENST00000492595 SEC22A-001 protein_coding Homo_sapiens 0 270

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