C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphatase and actin regulator 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000141272 Phactr3-006 ENSMUSG00000027525 10090 + 2:178327556-178331766 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBreastColonHeartKidneyLiverLungMuscleTestisENSMUST00000141272
Transcript ID Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Testis
ENSMUST00000141272 0.207±0.05 0.291±0.14 0.066±0.00 0.236±0.10 0.219±0.10 0.127±0.00 0.022±0.01 0.074±0.04 0.066±0.00 2.224±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001SC CIL_0001SC_0002 CGP 2:178118975-178407685

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000355648 PHACTR3-007 protein_coding Homo_sapiens 8.00001e-42 176
ENST00000359926 PHACTR3-003 protein_coding Homo_sapiens 8.00001e-42 176
ENST00000361300 PHACTR3-006 protein_coding Homo_sapiens 8.00001e-42 176
ENST00000371015 PHACTR3-001 protein_coding Homo_sapiens 9.99967e-42 176
ENST00000395636 PHACTR3-002 protein_coding Homo_sapiens 9.00054e-42 176
ENST00000492611 PHACTR3-004 retained_intron Homo_sapiens 0 243
ENST00000541461 PHACTR3-201 protein_coding Homo_sapiens 9.00054e-42 176

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