C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | syntaxin 18 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000141286  |
Stx18-007 |
ENSMUSG00000029125 |
10090 | + |
5:38134395-38136435  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_000967 | CIL_000967_0002 | VISTA | 5:37518652-38119645 |
| CIL_0008Y0 | CIL_0008Y0_0002 | VISTA | 5:37525669-38129220 |
| CIL_0008DJ | CIL_0008DJ_0002 | VISTA | 5:37551391-38152218 |
| CIL_000969 | CIL_000969_0002 | VISTA | 5:37601106-38202493 |
| CIL_00096C | CIL_00096C_0002 | VISTA | 5:37617742-38218594 |
| CIL_00096B | CIL_00096B_0002 | VISTA | 5:37667623-38269196 |
| CIL_0008QQ | CIL_0008QQ_0002 | VISTA | 5:37760247-38361421 |
| CIL_00096M | CIL_00096M_0002 | VISTA | 5:37765055-38366694 |
| CIL_0008ZA | CIL_0008ZA_0002 | VISTA | 5:37806142-38406996 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000306200
|
STX18-001 | protein_coding | Homo_sapiens | 0 | 261 |
|
ENST00000503692
|
STX18-003 | retained_intron | Homo_sapiens | 5e-31 | 141 |
|
ENST00000503861
|
STX18-006 | nonsense_mediated_decay | Homo_sapiens | 0 | 261 |
|
ENST00000515687
|
STX18-009 | retained_intron | Homo_sapiens | 0 | 261 |
