C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: CAS1 domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000141359 Casd1-003 ENSMUSG00000015189 10090 + 6:4601203-4621132 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00082O CIL_00082O_0002 VISTA 6:4156170-4759324
CIL_0007XR CIL_0007XR_0002 VISTA 6:4183463-4785322
CIL_00095G CIL_00095G_0002 VISTA 6:4188993-4790635
CIL_0008ZR CIL_0008ZR_0002 VISTA 6:4253537-4855066
CIL_0004SO CIL_0004SO_0003 CGP 6:4504814-4643381
CIL_0004SP CIL_0004SP_0003 CGP 6:4600840-4747204

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000297273 CASD1-001 protein_coding Homo_sapiens 0 497
ENST00000417387 CASD1-006 nonsense_mediated_decay Homo_sapiens 0 335
ENST00000443644 CASD1-005 nonsense_mediated_decay Homo_sapiens 0 287
ENST00000447923 CASD1-004 protein_coding Homo_sapiens 0 322
ENST00000618861 CASD1-201 protein_coding Homo_sapiens 0 497

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