C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA A830018L16 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000141512 A830018L16Rik-005 ENSMUSG00000057715 10090 + 1:11414112-11933740 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonHeartKidneyLungTestisENSMUST00000141512
Transcript ID Adipose Bladder Breast Colon Heart Kidney Lung Testis
ENSMUST00000141512 0.244±0.00 0.046±0.00 0.276±0.00 0.039±0.00 0.094±0.00 0.098±0.00 0.301±0.03 0.060±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001SD CIL_0001SD_0003 CGP 1:10993465-11975901
CIL_0001SG CIL_0001SG_0003 CGP 1:11414105-12861192

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000337103 C8orf34-002 protein_coding Homo_sapiens 0 1138
ENST00000348340 C8orf34-003 protein_coding Homo_sapiens 0 939
ENST00000349492 C8orf34-008 processed_transcript Homo_sapiens 0 483
ENST00000518698 C8orf34-001 protein_coding Homo_sapiens 0 1232
ENST00000521406 C8orf34-006 nonsense_mediated_decay Homo_sapiens 0 778
ENST00000523686 C8orf34-005 protein_coding Homo_sapiens 0 483

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