C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: trafficking protein particle complex 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000141557 Trappc13-002 ENSMUSG00000021711 10090 - 13:104142156-104178425 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000141557
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000141557 2.771±0.56 3.202±0.80 1.700±0.27 4.175±0.00 1.854±0.61 2.215±1.00 1.397±0.28 2.524±0.53 1.670±0.55 1.821±0.20 1.765±0.51 2.561±1.03 2.970±1.16 0.574±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000231526 TRAPPC13-003 protein_coding Homo_sapiens 0 1482
ENST00000399438 TRAPPC13-001 protein_coding Homo_sapiens 0 1607
ENST00000438419 TRAPPC13-004 protein_coding Homo_sapiens 0 1580
ENST00000504243 TRAPPC13-009 nonsense_mediated_decay Homo_sapiens 0 688
ENST00000504751 TRAPPC13-008 nonsense_mediated_decay Homo_sapiens 0 411
ENST00000505553 TRAPPC13-002 protein_coding Homo_sapiens 0 1456
ENST00000508304 TRAPPC13-013 retained_intron Homo_sapiens 0 723
ENST00000510585 CTC-534A2.2-001 protein_coding Homo_sapiens 3e-20 104
ENST00000512009 TRAPPC13-005 retained_intron Homo_sapiens 0 1112
ENST00000520525 TRAPPC13-014 retained_intron Homo_sapiens 0 472

Loading