C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | actin related protein 2/3 complex, subunit 1B | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000141602  |
Arpc1b-002 |
ENSMUSG00000029622 |
10090 | + |
5:145114316-145122635  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0005L5 | CIL_0005L5_0003 | CGP | 5:145083830-145130705 |
| CIL_0004TJ | CIL_0004TJ_0002 | CGP | 5:145114215-145140238 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003779 | IEA | actin binding |
| GO:0005885 | TAS | Arp2/3 protein complex |
| GO:0030833 | IEA | regulation of actin filament polymerization |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSDART00000033713
|
arpc1b-001 | protein_coding | Danio_rerio | 8e-24 | 113 |
|
ENST00000252725
|
ARPC1B-001 | protein_coding | Homo_sapiens | 0 | 261 |
|
ENST00000414376
|
ARPC1B-008 | protein_coding | Homo_sapiens | 0 | 261 |
|
ENST00000417330
|
ARPC1B-014 | protein_coding | Homo_sapiens | 0 | 263 |
|
ENST00000418347
|
ARPC1B-013 | protein_coding | Homo_sapiens | 0 | 263 |
|
ENST00000427217
|
ARPC1B-016 | protein_coding | Homo_sapiens | 0 | 263 |
|
ENST00000429246
|
ARPC1B-009 | protein_coding | Homo_sapiens | 2e-21 | 106 |
|
ENST00000431816
|
ARPC1B-015 | protein_coding | Homo_sapiens | 0 | 263 |
|
ENST00000432343
|
ARPC1B-024 | nonsense_mediated_decay | Homo_sapiens | 0 | 261 |
|
ENST00000441989
|
ARPC1A-003 | nonsense_mediated_decay | Homo_sapiens | 0 | 261 |
|
ENST00000443222
|
ARPC1B-007 | protein_coding | Homo_sapiens | 0 | 261 |
|
ENST00000445924
|
ARPC1B-018 | nonsense_mediated_decay | Homo_sapiens | 3e-37 | 159 |
|
ENST00000451682
|
ARPC1B-003 | protein_coding | Homo_sapiens | 0 | 263 |
|
ENST00000455009
|
ARPC1B-012 | protein_coding | Homo_sapiens | 0 | 263 |
|
ENST00000458033
|
ARPC1B-017 | protein_coding | Homo_sapiens | 0 | 263 |
|
ENST00000474880
|
ARPC1B-020 | processed_transcript | Homo_sapiens | 0 | 261 |
|
ENST00000484375
|
ARPC1B-025 | retained_intron | Homo_sapiens | 0 | 261 |
|
ENST00000484600
|
ARPC1B-011 | retained_intron | Homo_sapiens | 0 | 261 |
|
ENST00000493403
|
ARPC1B-019 | processed_transcript | Homo_sapiens | 2e-37 | 159 |
