C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: actin related protein 2/3 complex, subunit 1B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000033713 arpc1b-001 ENSDARG00000027063 7955 + 3:40803793-40815394 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000033713
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000033713 12.922±10.25 66.500±13.39 205.468±72.78 1.111±0.00 20.328±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005L5 CIL_0005L5_0001 CGP 3:40790892-40815394

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005515 IEA protein binding
GO:0005856 IEA cytoskeleton
GO:0030833 IEA regulation of actin filament polymerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000085679 Arpc1b-001 protein_coding Mus_musculus 0 486
ENSMUST00000126343 Arpc1b-004 retained_intron Mus_musculus 0 287
ENSMUST00000129033 Arpc1b-003 processed_transcript Mus_musculus 1e-23 113
ENSMUST00000141602 Arpc1b-002 protein_coding Mus_musculus 8e-24 113
ENSMUST00000153890 Gm5637-001 processed_pseudogene Mus_musculus 0 455

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