C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000141607 Sema6c-013 ENSMUSG00000038777 10090 + 3:95170323-95171895 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaENSMUST00000141607
Transcript ID Placenta
ENSMUST00000141607 1.706±1.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000581 CIL_000581_0003 CGP 3:95139521-95174024

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000341697 SEMA6C-004 protein_coding Homo_sapiens 0 580
ENST00000368912 SEMA6C-003 protein_coding Homo_sapiens 0 579
ENST00000368913 SEMA6C-002 protein_coding Homo_sapiens 0 579
ENST00000368914 SEMA6C-001 protein_coding Homo_sapiens 0 580
ENST00000464018 SEMA6C-006 processed_transcript Homo_sapiens 0 385

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