C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proline dehydrogenase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000141635 Prodh-007 ENSMUSG00000003526 10090 - 16:18072126-18079268 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonHeartKidneyLiverOvaryTestisENSMUST00000141635
Transcript ID Breast Colon Heart Kidney Liver Ovary Testis
ENSMUST00000141635 6.299±0.00 5.524±0.90 6.474±0.00 57.152±0.00 26.993±26.15 7.883±2.88 1.261±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00086B CIL_00086B_0002 VISTA 16:17508169-18111091
CIL_0005EQ CIL_0005EQ_0003 CGP 16:18052860-18090203

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000313755 PRODH-007 retained_intron Homo_sapiens 0 689
ENST00000334029 PRODH-002 protein_coding Homo_sapiens 0 689
ENST00000357068 PRODH-001 protein_coding Homo_sapiens 0 689
ENST00000420436 PRODH-004 protein_coding Homo_sapiens 0 689
ENST00000429300 PRODH-006 retained_intron Homo_sapiens 0 689
ENST00000438948 XXbac-B444P24.10-001 unprocessed_pseudogene Homo_sapiens 0 512
ENST00000482858 PRODH-005 retained_intron Homo_sapiens 0 689
ENST00000483718 DGCR6-004 nonsense_mediated_decay Homo_sapiens 0 193
ENST00000491604 PRODH-003 retained_intron Homo_sapiens 0 689
ENST00000609229 PRODH-014 retained_intron Homo_sapiens 0 425
ENST00000610940 PRODH-201 protein_coding Homo_sapiens 0 689
ENST00000615165 PRODH-202 protein_coding Homo_sapiens 0 695
ENST00000621424 PRODH-203 protein_coding Homo_sapiens 0 695

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