C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proline dehydrogenase (oxidase) 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000482858 PRODH-005 ENSG00000100033 9606 - 22:18912782-18936142 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaENST00000482858
Transcript ID Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000482858 0.897±0.73 0.097±0.00 0.053±0.00 0.430±0.33 0.083±0.00 0.205±0.09 0.274±0.00 2.620±1.67 0.055±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005EQ CIL_0005EQ_0001 CGP 22:18906028-18936553

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000136776 Prodh-001 protein_coding Mus_musculus 0 845
ENSMUST00000003620 Prodh-002 protein_coding Mus_musculus 0 845
ENSMUST00000141635 Prodh-007 nonsense_mediated_decay Mus_musculus 0 689
ENSMUST00000126087 Prodh-006 protein_coding Mus_musculus 0 678

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