C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DiGeorge syndrome critical region gene 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000483718 DGCR6-004 ENSG00000183628 9606 + 22:18906325-18914238 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartLiverMuscleOvaryPlacentaTestisENST00000483718
Transcript ID Adrenal Brain Breast Colon Heart Liver Muscle Ovary Placenta Testis
ENST00000483718 0.132±0.00 1.468±0.00 0.288±0.00 0.243±0.00 0.256±0.00 0.114±0.09 0.579±0.00 0.287±0.00 0.123±0.04 0.424±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005EQ CIL_0005EQ_0001 CGP 22:18906028-18936553

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000141635 Prodh-007 nonsense_mediated_decay Mus_musculus 0 193
ENSMUST00000136776 Prodh-001 protein_coding Mus_musculus 0 193
ENSMUST00000003620 Prodh-002 protein_coding Mus_musculus 0 193
ENSMUST00000126087 Prodh-006 protein_coding Mus_musculus 2e-30 139

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