C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: 2-oxoglutarate and iron-dependent oxygenase domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000141636 Ogfod1-003 ENSMUSG00000033009 10090 + 8:94037260-94039452 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00048W CIL_00048W_0002 CGP 8:94017770-94067921
CIL_00048V CIL_00048V_0002 CGP 8:94037198-94098811

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000336111 OGFOD1-002 nonsense_mediated_decay Homo_sapiens 2e-28 132
ENST00000561646 OGFOD1-009 protein_coding Homo_sapiens 3.00004e-41 172
ENST00000562150 OGFOD1-011 protein_coding Homo_sapiens 0 289
ENST00000563733 OGFOD1-005 retained_intron Homo_sapiens 0 316
ENST00000565682 OGFOD1-010 nonsense_mediated_decay Homo_sapiens 0 320
ENST00000566157 OGFOD1-001 protein_coding Homo_sapiens 0 316
ENST00000568172 OGFOD1-008 processed_transcript Homo_sapiens 0 316
ENST00000568397 OGFOD1-003 protein_coding Homo_sapiens 0 316
ENST00000569645 OGFOD1-004 retained_intron Homo_sapiens 0 329
ENST00000569802 OGFOD1-007 nonsense_mediated_decay Homo_sapiens 1.99993e-41 172

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