Transcript ID | Adipose | Adrenal | Brain | Breast | Colon | Kidney | Liver | Ovary | Placenta |
---|---|---|---|---|---|---|---|---|---|
ENST00000566157 | 2.882±0.00 | 5.367±0.00 | 4.276±1.43 | 2.282±1.05 | 1.711±0.33 | 0.786±0.00 | 1.552±0.00 | 2.810±1.24 | 2.280±0.36 |
Transcript Info |
||||||
Description: | 2-oxoglutarate and iron-dependent oxygenase domain containing 1 | |||||
---|---|---|---|---|---|---|
Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000566157 | OGFOD1-001 | ENSG00000087263 | 9606 | + | 16:56451490-56479100 | protein_coding |
Expression Patterns
|
Conserved Regions | |||
---|---|---|---|
Region ID | Sub-Region | Region Type | Position |
CIL_00048T | CIL_00048T_0001 | CGP | 16:56361452-56452199 |
CIL_00048W | CIL_00048W_0001 | CGP | 16:56429133-56479100 |
CIL_00048V | CIL_00048V_0001 | CGP | 16:56451490-56520283 |
Gene Ontology | ||
---|---|---|
GO ID | Evidence Type | GO Description |
GO:0005506 | IEA | iron ion binding |
GO:0005634 | IDA | nucleus |
GO:0005737 | IDA | cytoplasm |
GO:0006449 | IMP | regulation of translational termination |
GO:0008283 | IMP | cell proliferation |
GO:0010494 | IMP | cytoplasmic stress granule |
GO:0016705 | IEA | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
GO:0016706 | IEA | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors |
GO:0018126 | IDA | protein hydroxylation |
GO:0019511 | IDA | peptidyl-proline hydroxylation |
GO:0031418 | IEA | L-ascorbic acid binding |
GO:0031543 | IDA | peptidyl-proline dioxygenase activity |
GO:0031544 | IDA | peptidyl-proline 3-dioxygenase activity |
GO:0034063 | IMP | stress granule assembly |
GO:0055114 | IEA | oxidation-reduction process |
Homologs | |||||
ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
ENSMUST00000109556 | Ogfod1-001 | protein_coding | Mus_musculus | 0 | 1594 |
ENSMUST00000060632 | Ogfod1-004 | protein_coding | Mus_musculus | 0 | 1557 |
ENSMUST00000127634 | Ogfod1-005 | processed_transcript | Mus_musculus | 0 | 747 |
ENSMUST00000093301 | Ogfod1-002 | protein_coding | Mus_musculus | 0 | 726 |
ENSMUST00000172674 | Ogfod1-007 | processed_transcript | Mus_musculus | 0 | 686 |
ENSMUST00000145717 | Ogfod1-006 | retained_intron | Mus_musculus | 0 | 496 |
ENSMUST00000141636 | Ogfod1-003 | retained_intron | Mus_musculus | 0 | 316 |
ENSMUST00000189018 | Ccdc86-003 | retained_intron | Mus_musculus | 6e-16 | 92 |
ENSMUST00000057256 | 6030458C11Rik-201 | protein_coding | Mus_musculus | 0.0000000000001 | 84 |
ENSMUST00000169308 | 0610011F06Rik-006 | protein_coding | Mus_musculus | 0.00000000002 | 77 |
ENSMUST00000110456 | 0610011F06Rik-005 | nonsense_mediated_decay | Mus_musculus | 0.00000000002 | 77 |
ENSMUST00000173269 | Neu1-002 | retained_intron | Mus_musculus | 0.00008 | 55 |