C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: elongation factor Tu GTP binding domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000141726 Eftud1-003 ENSMUSG00000038563 10090 + 7:82648614-82674555 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonHeartOvaryENSMUST00000141726
Transcript ID Adipose Breast Colon Heart Ovary
ENSMUST00000141726 3.415±0.00 2.875±1.19 1.987±0.04 0.872±0.11 4.041±1.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007U9 CIL_0007U9_0002 VISTA 7:82082717-82683985

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0005575 ND cellular_component

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000268206 EFTUD1-002 protein_coding Homo_sapiens 0 917
ENST00000359445 EFTUD1-001 protein_coding Homo_sapiens 0 614
ENST00000557939 EFTUD1-006 protein_coding Homo_sapiens 0 278
ENST00000558187 EFTUD1P1-001 processed_transcript Homo_sapiens 0 496
ENST00000558550 EFTUD1P1-003 processed_transcript Homo_sapiens 0 272
ENST00000560401 EFTUD1P1-002 transcribed_unprocessed_pseudogene Homo_sapiens 0 876
ENST00000561389 EFTUD1-003 nonsense_mediated_decay Homo_sapiens 0 501

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