C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: expressed sequence C87436
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000141972 C87436-003 ENSMUSG00000046679 10090 + 6:86438692-86470388 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverLungMusclePlacentaENSMUST00000141972
Transcript ID Bladder Brain Liver Lung Muscle Placenta
ENSMUST00000141972 1.740±0.28 1.024±0.33 0.867±0.13 0.958±0.00 0.496±0.16 0.630±0.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089T CIL_00089T_0002 VISTA 6:86179085-86780169

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264434 C2orf42-001 protein_coding Homo_sapiens 0 1315
ENST00000417203 C2orf42-007 protein_coding Homo_sapiens 3e-36 156
ENST00000417865 C2orf42-006 protein_coding Homo_sapiens 0 619
ENST00000419381 C2orf42-014 protein_coding Homo_sapiens 0 484
ENST00000420306 C2orf42-002 protein_coding Homo_sapiens 0 1267
ENST00000425268 C2orf42-011 protein_coding Homo_sapiens 0 298
ENST00000428010 C2orf42-005 protein_coding Homo_sapiens 0 302
ENST00000428751 C2orf42-008 protein_coding Homo_sapiens 0 200
ENST00000447804 C2orf42-004 protein_coding Homo_sapiens 0 638
ENST00000457952 C2orf42-012 protein_coding Homo_sapiens 0 484
ENST00000470096 C2orf42-015 processed_transcript Homo_sapiens 0 453

Loading