C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 25 (mitochondrial carrier, citrate transporter), member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000142022 Slc25a1-005 ENSMUSG00000003528 10090 - 16:17927150-17928129 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000142022
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000142022 12.637±0.00 30.357±0.00 9.245±1.74 7.429±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00086B CIL_00086B_0002 VISTA 16:17508169-18111091
CIL_000244 CIL_000244_0002 CGP 16:17913107-17928219

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000215882 SLC25A1-001 protein_coding Homo_sapiens 0 564
ENST00000451283 SLC25A1-003 protein_coding Homo_sapiens 0 435
ENST00000461267 SLC25A1-005 processed_transcript Homo_sapiens 0 440
ENST00000468824 SLC25A1-004 processed_transcript Homo_sapiens 0.000000000001 77
ENST00000470922 SLC25A1-002 retained_intron Homo_sapiens 0 409

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