C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phospholipase A2, group IVF
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000397272 PLA2G4F-001 ENSG00000168907 9606 - 15:42139034-42156636 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainHeartKidneyLiverOvaryENST00000397272
Transcript ID Adrenal Brain Heart Kidney Liver Ovary
ENST00000397272 0.022±0.00 0.017±0.00 0.150±0.12 1.408±0.00 0.021±0.00 1.304±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005PO CIL_0005PO_0001 CGP 15:42067009-42156636
CIL_0005PN CIL_0005PN_0001 CGP 15:42139034-42208316

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001516 IEA prostaglandin biosynthetic process
GO:0004620 IEA phospholipase activity
GO:0004622 IEA lysophospholipase activity
GO:0004623 IEA phospholipase A2 activity
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005764 IEA lysosome
GO:0005829 TAS cytosol
GO:0006644 TAS phospholipid metabolic process
GO:0008152 IEA metabolic process
GO:0009395 IEA phospholipid catabolic process
GO:0015908 IEA fatty acid transport
GO:0031982 IEA vesicle
GO:0032587 IEA ruffle membrane
GO:0036148 TAS phosphatidylglycerol acyl-chain remodeling
GO:0036149 TAS phosphatidylinositol acyl-chain remodeling
GO:0036150 TAS phosphatidylserine acyl-chain remodeling
GO:0036151 TAS phosphatidylcholine acyl-chain remodeling
GO:0036152 TAS phosphatidylethanolamine acyl-chain remodeling
GO:0044281 TAS small molecule metabolic process
GO:0046474 TAS glycerophospholipid biosynthetic process
GO:0046872 IEA metal ion binding
GO:0047498 IEA calcium-dependent phospholipase A2 activity
GO:0050482 IEA arachidonic acid secretion
GO:0071236 IEA cellular response to antibiotic
GO:0071407 IEA cellular response to organic cyclic compound

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000054651 Pla2g4f-001 protein_coding Mus_musculus 0 1818
ENSMUST00000142183 Pla2g4f-002 retained_intron Mus_musculus 0 761

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