C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: MRV integration site 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000142368 Mrvi1-003 ENSMUSG00000005611 10090 - 7:110923860-110982058 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonLiverENSMUST00000142368
Transcript ID Adrenal Colon Liver
ENSMUST00000142368 1.958±0.00 8.738±0.00 0.167±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004IK CIL_0004IK_0002 CGP 7:110850607-110982461
CIL_0004JB CIL_0004JB_0002 CGP 7:110868266-111056377

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000423302 MRVI1-001 protein_coding Homo_sapiens 0 736
ENST00000424001 MRVI1-201 protein_coding Homo_sapiens 0 616
ENST00000526414 MRVI1-003 nonsense_mediated_decay Homo_sapiens 0 499
ENST00000527509 MRVI1-014 protein_coding Homo_sapiens 0 675
ENST00000529448 MRVI1-004 nonsense_mediated_decay Homo_sapiens 0 436
ENST00000529547 MRVI1-008 protein_coding Homo_sapiens 2.8026e-45 185
ENST00000531107 MRVI1-002 protein_coding Homo_sapiens 0 750
ENST00000531786 MRVI1-006 processed_transcript Homo_sapiens 2.94273e-44 182
ENST00000532037 MRVI1-011 processed_transcript Homo_sapiens 2.00386e-43 180
ENST00000533631 MRVI1-010 nonsense_mediated_decay Homo_sapiens 0 377
ENST00000534266 MRVI1-005 protein_coding Homo_sapiens 0 436
ENST00000541483 MRVI1-013 protein_coding Homo_sapiens 0 560
ENST00000547195 MRVI1-202 protein_coding Homo_sapiens 0 436
ENST00000558540 MRVI1-015 protein_coding Homo_sapiens 0 616

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