C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: acyl-CoA synthetase long-chain family member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000142704 Acsl3-003 ENSMUSG00000032883 10090 + 1:78657883-78706967 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000142704
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000142704 1.477±0.36 1.971±0.43 5.595±1.29 10.041±0.77 1.009±0.07 10.483±5.07 0.550±0.18 1.832±0.65 5.105±2.53 2.167±0.73 2.908±1.00 3.034±2.00 10.301±3.62 2.573±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006XK CIL_0006XK_0002 CGP 1:78510991-78707743

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004467 IEA long-chain fatty acid-CoA ligase activity
GO:0005524 IEA ATP binding
GO:0005741 IEA mitochondrial outer membrane
GO:0005777 IEA peroxisome
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000357430 ACSL3-001 protein_coding Homo_sapiens 0 3338
ENST00000392066 ACSL3-002 protein_coding Homo_sapiens 0 3338
ENST00000407441 ACSL3-007 protein_coding Homo_sapiens 0 610
ENST00000421680 ACSL3-005 protein_coding Homo_sapiens 0 643
ENST00000474422 ACSL3-008 retained_intron Homo_sapiens 0 377
ENST00000495541 ACSL3-009 retained_intron Homo_sapiens 0 736
ENST00000540115 ACSL3-012 protein_coding Homo_sapiens 0 623
ENST00000542810 ACSL3-011 retained_intron Homo_sapiens 0 340

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