C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 26, member 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000142888 Slc26a5-003 ENSMUSG00000029015 10090 - 5:21811018-21847380 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartOvaryTestisENSMUST00000142888
Transcript ID Brain Colon Heart Ovary Testis
ENSMUST00000142888 0.022±0.00 0.042±0.00 0.033±0.00 0.045±0.02 0.014±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001RC CIL_0001RC_0003 CGP 5:21785283-21865604
CIL_0005C9 CIL_0005C9_0002 CGP 5:21810655-22344702

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005886 IDA plasma membrane
GO:0008271 IEA secondary active sulfate transmembrane transporter activity
GO:0016021 IEA integral component of membrane
GO:0016323 IDA basolateral plasma membrane
GO:0016328 IDA lateral plasma membrane
GO:0030507 IDA spectrin binding
GO:0042391 IDA regulation of membrane potential
GO:1902358 IEA sulfate transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000306312 SLC26A5-001 protein_coding Homo_sapiens 0 1544
ENST00000339444 SLC26A5-002 protein_coding Homo_sapiens 0 1544
ENST00000354356 SLC26A5-201 protein_coding Homo_sapiens 0 1544
ENST00000356767 SLC26A5-003 protein_coding Homo_sapiens 0 1232
ENST00000393723 SLC26A5-010 protein_coding Homo_sapiens 0 1524
ENST00000393727 SLC26A5-009 protein_coding Homo_sapiens 0 1524
ENST00000393729 SLC26A5-013 protein_coding Homo_sapiens 0 1066
ENST00000393730 SLC26A5-008 protein_coding Homo_sapiens 0 1544
ENST00000393735 SLC26A5-004 protein_coding Homo_sapiens 0 1544
ENST00000423416 SLC26A5-011 nonsense_mediated_decay Homo_sapiens 0 1544
ENST00000432958 SLC26A5-202 protein_coding Homo_sapiens 0 1544
ENST00000445809 SLC26A5-005 nonsense_mediated_decay Homo_sapiens 0 913
ENST00000454864 SLC26A5-007 nonsense_mediated_decay Homo_sapiens 0 2222
ENST00000456463 SLC26A5-012 nonsense_mediated_decay Homo_sapiens 0 536
ENST00000487407 SLC26A5-006 retained_intron Homo_sapiens 0 536

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