C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: partner and localizer of BRCA2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000142952 Palb2-005 ENSMUSG00000044702 10090 - 7:122111572-122132888 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonKidneyLiverLungMuscleOvaryPlacentaENSMUST00000142952
Transcript ID Adipose Bladder Breast Colon Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000142952 0.355±0.09 0.169±0.00 0.512±0.27 0.296±0.00 0.248±0.00 0.098±0.06 0.073±0.00 0.104±0.00 0.434±0.01 0.331±0.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VC CIL_0003VC_0003 CGP 7:122085403-122132946
CIL_0006D1 CIL_0006D1_0002 CGP 7:122107262-122149044

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001756 IMP somitogenesis
GO:0001833 IMP inner cell mass cell proliferation
GO:0007498 IMP mesoderm development
GO:0009887 IMP organ morphogenesis
GO:0036342 IMP post-anal tail morphogenesis
GO:0043066 IMP negative regulation of apoptotic process

Homologs

No Homologs available.

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