C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Bardet-Biedl syndrome 5 (human)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000143165 Bbs5-007 ENSMUSG00000063145 10090 + 2:69655424-69665028 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonKidneyLiverOvaryENSMUST00000143165
Transcript ID Breast Colon Kidney Liver Ovary
ENSMUST00000143165 0.575±0.00 0.336±0.00 0.604±0.00 0.320±0.08 1.748±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HC CIL_0008HC_0002 VISTA 2:69119794-69721610
CIL_00063E CIL_00063E_0002 CGP 2:69424340-69667571

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295240 BBS5-001 protein_coding Homo_sapiens 0 553
ENST00000392663 BBS5-002 protein_coding Homo_sapiens 0 267
ENST00000443151 BBS5-005 nonsense_mediated_decay Homo_sapiens 0 315
ENST00000472667 BBS5-003 retained_intron Homo_sapiens 0 191
ENST00000513963 RP11-724O16.1-001 protein_coding Homo_sapiens 0 553

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