C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Bardet-Biedl syndrome 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000472667 BBS5-003 ENSG00000163093 9606 + 2:169499034-169506490 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonKidneyLiverOvaryPlacentaENST00000472667
Transcript ID Adipose Adrenal Bladder Brain Colon Kidney Liver Ovary Placenta
ENST00000472667 0.615±0.00 1.346±0.00 0.824±0.00 0.589±0.00 0.500±0.00 0.165±0.00 0.469±0.00 1.422±1.33 0.358±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00063E CIL_00063E_0001 CGP 2:169127109-169506655

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000134659 Bbs5-002 nonsense_mediated_decay Mus_musculus 0 499
ENSMUST00000074963 Bbs5-001 protein_coding Mus_musculus 0 499
ENSMUST00000112286 Bbs5-003 protein_coding Mus_musculus 0 496
ENSMUST00000127806 Bbs5-008 protein_coding Mus_musculus 0 316
ENSMUST00000143165 Bbs5-007 retained_intron Mus_musculus 0 191

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