| Transcript ID | Brain | Colon |
|---|---|---|
| ENSMUST00000143275 | 0.272±0.01 | 2.905±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | synaptopodin | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000143275  |
Synpo-008 |
ENSMUSG00000043079 |
10090 | - |
18:60600209-60648319  |
protein_coding |
Expression Patterns
|
Conserved Regions |
|---|
| Gene is not located within a conserved region. |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0001725 | IDA | stress fiber |
| GO:0003779 | IDA | actin binding |
| GO:0005737 | IEA | cytoplasm |
| GO:0005923 | IEA | tight junction |
| GO:0015629 | IDA | actin cytoskeleton |
| GO:0030425 | ISO | dendrite |
| GO:0030865 | NAS | cortical cytoskeleton organization |
| GO:0032233 | IEA | positive regulation of actin filament bundle assembly |
| GO:0043197 | NAS | dendritic spine |
| GO:0045211 | IEA | postsynaptic membrane |
| GO:0051492 | IDA | regulation of stress fiber assembly |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000307662
|
SYNPO-001 | protein_coding | Homo_sapiens | 0 | 1766 |
|
ENST00000394243
|
SYNPO-002 | protein_coding | Homo_sapiens | 0 | 1940 |
|
ENST00000518872
|
SYNPO-005 | processed_transcript | Homo_sapiens | 0 | 213 |
|
ENST00000519664
|
SYNPO-004 | protein_coding | Homo_sapiens | 0 | 1766 |
|
ENST00000522122
|
SYNPO-003 | protein_coding | Homo_sapiens | 0 | 1940 |
