C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: small nuclear ribonucleoprotein 200 (U5)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000143481 Snrnp200-004 ENSMUSG00000003660 10090 + 2:127236809-127238326 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaENSMUST00000143481
Transcript ID Placenta
ENSMUST00000143481 42.782±13.35

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000323853 SNRNP200-001 protein_coding Homo_sapiens 0 460
ENST00000429650 SNRNP200-006 nonsense_mediated_decay Homo_sapiens 0 460
ENST00000480835 SNRNP200-009 retained_intron Homo_sapiens 0 588
ENST00000497539 SNRNP200-005 retained_intron Homo_sapiens 0 460
ENST00000583145 RP13-104F24.3-001 unprocessed_pseudogene Homo_sapiens 0 265

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