C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: small nuclear ribonucleoprotein 200kDa (U5)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000497539 SNRNP200-005 ENSG00000144028 9606 - 2:96274731-96284723 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000497539
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000497539 12.854±0.00 37.438±0.00 11.483±0.00 19.814±0.00 5.291±0.00 9.127±0.00 14.452±0.00 19.813±0.00 14.021±10.86 54.386±30.76 27.335±8.42 34.741±0.12

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000103220 Snrnp200-001 protein_coding Mus_musculus 0 3133
ENSDART00000109885 snrnp200-001 protein_coding Danio_rerio 0 1700
ENSMUST00000131435 Snrnp200-005 retained_intron Mus_musculus 0 466
ENSMUST00000143481 Snrnp200-004 retained_intron Mus_musculus 0 460

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