| Transcript ID | Brain | Ovary | Placenta | Testis |
|---|---|---|---|---|
| ENSMUST00000143868 | 4.571±0.00 | 19.679±0.00 | 27.736±0.41 | 3.068±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | lysine (K)-specific demethylase 1B | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000143868  |
Kdm1b-004 |
ENSMUSG00000038080 |
10090 | + |
13:47043570-47053730  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00090E | CIL_00090E_0002 | VISTA | 13:46584783-47186478 |
| CIL_0008X6 | CIL_0008X6_0002 | VISTA | 13:47010584-47612217 |
| CIL_0003RL | CIL_0003RL_0002 | CGP | 13:47012558-47044737 |
| CIL_0003RU | CIL_0003RU_0002 | CGP | 13:47025170-47084613 |
| CIL_0003RV | CIL_0003RV_0002 | CGP | 13:47043499-47106201 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005634 | IDA | nucleus |
| GO:0006349 | IMP | regulation of gene expression by genetic imprinting |
| GO:0008270 | IDA | zinc ion binding |
| GO:0034648 | IDA | histone demethylase activity (H3-dimethyl-K4 specific) |
| GO:0034649 | IDA | histone demethylase activity (H3-monomethyl-K4 specific) |
| GO:0034720 | IDA | histone H3-K4 demethylation |
| GO:0043046 | IMP | DNA methylation involved in gamete generation |
| GO:0050660 | IDA | flavin adenine dinucleotide binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000297792
|
KDM1B-002 | protein_coding | Homo_sapiens | 0 | 532 |
