C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: trafficking protein particle complex 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000144060 Trappc13-001 ENSMUSG00000021711 10090 - 13:104142149-104178469 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryENSMUST00000144060
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary
ENSMUST00000144060 1.396±0.37 1.424±0.64 1.451±0.40 6.757±0.00 1.124±0.30 1.594±0.00 0.626±0.14 0.817±0.11 1.163±0.26 1.483±0.00 2.032±0.31

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000231526 TRAPPC13-003 protein_coding Homo_sapiens 0 1550
ENST00000399438 TRAPPC13-001 protein_coding Homo_sapiens 0 1478
ENST00000438419 TRAPPC13-004 protein_coding Homo_sapiens 0 1482
ENST00000504243 TRAPPC13-009 nonsense_mediated_decay Homo_sapiens 0 571
ENST00000504751 TRAPPC13-008 nonsense_mediated_decay Homo_sapiens 0 494
ENST00000505553 TRAPPC13-002 protein_coding Homo_sapiens 0 1559
ENST00000508304 TRAPPC13-013 retained_intron Homo_sapiens 0 723
ENST00000510585 CTC-534A2.2-001 protein_coding Homo_sapiens 3e-20 104
ENST00000512009 TRAPPC13-005 retained_intron Homo_sapiens 0 1195

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