C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tectonic family member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000144566 Tctn3-005 ENSMUSG00000025008 10090 - 19:40611125-40612188 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartLiverLungOvaryTestisENSMUST00000144566
Transcript ID Brain Breast Colon Heart Liver Lung Ovary Testis
ENSMUST00000144566 3.297±0.00 2.575±0.53 1.555±0.00 1.523±0.00 0.181±0.00 3.558±0.00 11.337±3.35 1.046±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00095J CIL_00095J_0002 VISTA 19:40075645-40678667
CIL_0007T2 CIL_0007T2_0002 VISTA 19:40167411-40768695
CIL_00067D CIL_00067D_0002 CGP 19:40550257-40612233
CIL_00067C CIL_00067C_0002 CGP 19:40596446-40741602

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265993 TCTN3-001 protein_coding Homo_sapiens 0 257
ENST00000371209 TCTN3-007 protein_coding Homo_sapiens 0 257
ENST00000371217 TCTN3-009 protein_coding Homo_sapiens 0 257
ENST00000430368 TCTN3-010 protein_coding Homo_sapiens 0 261
ENST00000478245 TCTN3-006 retained_intron Homo_sapiens 0 279
ENST00000497399 TCTN3-005 retained_intron Homo_sapiens 0 255
ENST00000614499 TCTN3-201 protein_coding Homo_sapiens 0 257

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