C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: centromere protein A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000144742 Cenpa-001 ENSMUSG00000029177 10090 + 5:30666886-30674827 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000144742
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000144742 1.172±0.50 1.466±0.00 1.165±0.00 5.123±3.99 3.128±0.56 3.910±0.40 0.482±0.04 27.330±9.37 1.265±0.10 0.339±0.14 4.438±0.70 11.963±6.99 0.981±0.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WF CIL_0007WF_0002 VISTA 5:30314016-30916922
CIL_00004O CIL_00004O_0002 CGP 5:30647933-30674827
CIL_00004H CIL_00004H_0002 CGP 5:30666777-30799375

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000132 IEA establishment of mitotic spindle orientation
GO:0000775 ISO chromosome, centromeric region
GO:0000778 IEA condensed nuclear chromosome kinetochore
GO:0000780 IEA condensed nuclear chromosome, centromeric region
GO:0000786 IEA nucleosome
GO:0000939 IDA condensed chromosome inner kinetochore
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0046982 IEA protein heterodimerization activity
GO:0051382 IEA kinetochore assembly
GO:0071459 IEA protein localization to chromosome, centromeric region

Homologs

No Homologs available.

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