C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00004H_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000115163-ENSG00000157851 CGP 9606 2:26764289-26950351
GeneTranscriptPositionBiotype
ENSG00000115163 (CENPA)
centromere protein A 		ENST00000233505 (CENPA-006) 26786068-26794589 protein_coding
ENST00000335756 (CENPA-001) 26785997-26794593 protein_coding
ENST00000419525 (CENPA-005) 26786102-26793942 nonsense_mediated_decay
ENST00000460030 (CENPA-002) 26786143-26801067 processed_transcript
ENST00000472719 (CENPA-004) 26786027-26794076 processed_transcript
ENST00000475662 (CENPA-003) 26764289-26794589 processed_transcript
ENSG00000157851 (DPYSL5)
dihydropyrimidinase-like 5 		ENST00000288699 (DPYSL5-001) 26848101-26950351 protein_coding
ENST00000401478 (DPYSL5-002) 26848289-26947197 protein_coding
ENST00000431402 (DPYSL5-004) 26848424-26927401 protein_coding
ENST00000434719 (DPYSL5-005) 26848508-26927356 protein_coding
ENST00000450961 (DPYSL5-003) 26847747-26927328 protein_coding
ENST00000484882 (DPYSL5-006) 26938459-26948856 retained_intron
ENST00000614712 (DPYSL5-201) 26848424-26950350 protein_coding
ENSG00000213699 (SLC35F6)
solute carrier family 35, member F6 		ENST00000344420 (SLC35F6-001) 26764288-26781231 protein_coding
ENST00000414029 (SLC35F6-003) 26764325-26781147 nonsense_mediated_decay
ENST00000429494 (SLC35F6-002) 26764284-26781140 nonsense_mediated_decay
ENST00000482746 (SLC35F6-004) 26764290-26778219 processed_transcript
ENSG00000230286 (AC013472.4)
 ENST00000416226 (AC013472.4-001) 26950308-27009807 antisense
CIL_00004H_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029177-ENSMUSG00000029168 CGP 10090 5:30666777-30799375
GeneTranscriptPositionBiotype
ENSMUSG00000029168 (Dpysl5)
dihydropyrimidinase-like 5 		ENSMUST00000088081 (Dpysl5-002) 30711894-30799369 protein_coding
ENSMUST00000101442 (Dpysl5-003) 30711901-30748014 protein_coding
ENSMUST00000114729 (Dpysl5-001) 30711564-30799375 protein_coding
ENSMUST00000127365 (Dpysl5-004) 30778130-30786934 processed_transcript
ENSMUST00000136657 (Dpysl5-005) 30791999-30796414 processed_transcript
ENSMUST00000138625 (Dpysl5-006) 30793720-30796561 retained_intron
ENSMUSG00000029177 (Cenpa)
centromere protein A 		ENSMUST00000031073 (Cenpa-003) 30666974-30674409 nonsense_mediated_decay
ENSMUST00000133316 (Cenpa-002) 30666777-30674378 nonsense_mediated_decay
ENSMUST00000134372 (Cenpa-007) 30671955-30674202 retained_intron
ENSMUST00000134846 (Cenpa-004) 30666912-30674315 nonsense_mediated_decay
ENSMUST00000144742 (Cenpa-001) 30666886-30674827 protein_coding
ENSMUST00000149759 (Cenpa-006) 30666943-30669759 processed_transcript
ENSMUST00000150810 (Cenpa-005) 30666935-30674409 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00004H_0001ENSG00000115163ENST00000233505ENST00000335756ENST00000419525ENST00000460030ENST00000472719ENST00000475662ENSG00000157851ENST00000288699ENST00000401478ENST00000431402ENST00000434719ENST00000450961ENST00000484882ENST00000614712ENSG00000213699ENST00000344420ENST00000414029ENST00000429494ENST00000482746ENSG00000230286ENST00000416226CIL_00004H_0002ENSMUSG00000029168ENSMUST00000088081ENSMUST00000101442ENSMUST00000114729ENSMUST00000127365ENSMUST00000136657ENSMUST00000138625ENSMUSG00000029177ENSMUST00000031073ENSMUST00000133316ENSMUST00000134372ENSMUST00000134846ENSMUST00000144742ENSMUST00000149759ENSMUST00000150810
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00004H_0001ENSG00000115163ENST00000233505ENST00000335756ENSG00000157851ENST00000288699ENST00000401478ENST00000484882ENST00000614712ENSG00000213699ENST00000344420ENST00000414029ENST00000429494ENSG00000230286ENST00000416226CIL_00004H_0002ENSMUSG00000029168ENSMUST00000088081ENSMUST00000114729ENSMUST00000127365ENSMUSG00000029177ENSMUST00000031073ENSMUST00000133316ENSMUST00000134372ENSMUST00000134846ENSMUST00000144742ENSMUST00000150810
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115163 ENST00000233505 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.329±0.00 2.760±0.00 2.429±0.00
ENST00000335756 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.939±0.00 N/A N/A
ENST00000419525 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460030 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472719 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475662 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000157851 ENST00000288699 N/A 0.031±0.00 N/A 16.047±0.00 0.013±0.00 N/A 0.008±0.00 N/A N/A 0.055±0.00 0.010±0.00 0.175±0.13 0.011±0.00 0.484±0.00
ENST00000401478 N/A N/A N/A 1.896±0.00 N/A 0.064±0.00 N/A N/A N/A N/A N/A N/A 0.027±0.00 2.268±0.35
ENST00000431402 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000434719 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450961 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484882 0.050±0.00 0.119±0.00 0.032±0.00 N/A 0.054±0.00 N/A 0.016±0.00 0.055±0.00 0.009±0.00 N/A 0.016±0.00 0.015±0.00 N/A N/A
ENST00000614712 N/A 0.030±0.00 N/A N/A 0.013±0.00 0.028±0.00 0.008±0.00 0.064±0.00 N/A 0.015±0.00 0.010±0.00 0.044±0.00 0.023±0.00 N/A
ENSG00000213699 ENST00000344420 11.831±0.00 9.363±0.00 1.682±0.00 3.251±1.62 3.585±1.06 2.359±1.11 2.811±1.81 8.143±0.00 6.130±0.00 2.717±1.00 2.891±0.00 5.115±3.63 6.232±3.27 3.178±2.35
ENST00000414029 N/A N/A N/A 2.729±0.00 N/A N/A N/A 4.844±2.62 4.031±0.00 1.232±0.00 3.302±2.75 2.119±0.42 4.309±0.00 N/A
ENST00000429494 21.709±0.00 6.453±0.00 N/A N/A 7.360±0.00 4.118±0.00 1.733±1.22 5.949±0.00 1.992±0.00 2.620±0.90 3.164±0.00 3.132±0.00 4.133±0.00 3.065±0.77
ENST00000482746 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000230286 ENST00000416226 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.417±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029168 ENSMUST00000088081 0.104±0.04 0.258±0.16 N/A 9.607±8.84 0.126±0.04 0.301±0.11 0.234±0.02 0.096±0.03 0.028±0.01 1.394±0.36 0.257±0.12 3.097±1.69 0.112±0.06 N/A
ENSMUST00000101442 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000114729 0.112±0.06 0.118±0.05 0.105±0.00 77.136±52.57 0.324±0.13 0.324±0.11 0.114±0.03 0.141±0.06 0.098±0.09 0.761±0.12 0.130±0.07 5.866±2.51 0.175±0.08 13.880±6.50
ENSMUST00000127365 N/A 0.316±0.07 N/A N/A N/A 0.941±0.16 0.582±0.05 0.252±0.05 0.085±0.04 N/A N/A 15.071±0.00 N/A N/A
ENSMUST00000136657 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138625 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000029177 ENSMUST00000031073 N/A N/A N/A N/A 2.152±0.00 N/A N/A N/A N/A N/A N/A 7.234±0.69 N/A N/A
ENSMUST00000133316 3.457±1.85 6.017±1.50 1.756±0.21 12.338±2.44 7.473±2.49 12.646±2.05 15.039±1.57 1.985±0.40 22.900±23.59 4.737±0.51 0.495±0.12 10.727±2.96 11.891±8.92 1.298±0.19
ENSMUST00000134372 0.876±0.00 N/A N/A 6.517±0.00 2.013±0.00 N/A 4.512±0.04 0.616±0.04 5.528±4.54 N/A 0.192±0.06 3.630±1.67 0.770±0.00 0.477±0.00
ENSMUST00000134846 N/A N/A N/A N/A N/A N/A N/A 0.442±0.00 N/A N/A 0.633±0.14 5.103±0.00 N/A 0.599±0.00
ENSMUST00000144742 1.172±0.50 1.466±0.00 1.165±0.00 5.123±3.99 3.128±0.56 3.910±0.40 N/A 0.482±0.04 27.330±9.37 1.265±0.10 0.339±0.14 4.438±0.70 11.963±6.99 0.981±0.30
ENSMUST00000149759 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150810 N/A N/A N/A 0.770±0.00 N/A N/A N/A N/A 0.426±0.00 N/A 0.252±0.02 2.375±0.00 3.919±4.43 0.425±0.14

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