C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium channel, subfamily T, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000145544 Kcnt1-006 ENSMUSG00000058740 10090 + 2:25908063-25916923 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonLiverMusclePlacentaTestisENSMUST00000145544
Transcript ID Brain Breast Colon Liver Muscle Placenta Testis
ENSMUST00000145544 7.747±6.30 0.016±0.00 0.181±0.07 0.035±0.01 0.049±0.02 0.080±0.10 0.099±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001EW CIL_0001EW_0002 CGP 2:25842995-25918273
CIL_0001EV CIL_0001EV_0002 CGP 2:25863795-25983282

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000113556 kcnt1-201 protein_coding Danio_rerio 2e-23 115
ENSDART00000150936 kcnt1-001 protein_coding Danio_rerio 2e-23 115
ENST00000263604 KCNT1-201 protein_coding Homo_sapiens 0 809
ENST00000371757 KCNT1-002 protein_coding Homo_sapiens 0 553
ENST00000460750 KCNT1-003 nonsense_mediated_decay Homo_sapiens 0 872
ENST00000486577 KCNT1-007 protein_coding Homo_sapiens 0 872
ENST00000487664 KCNT1-001 protein_coding Homo_sapiens 0 872
ENST00000488444 KCNT1-005 protein_coding Homo_sapiens 0 878
ENST00000490355 KCNT1-006 protein_coding Homo_sapiens 0 870
ENST00000490363 KCNT1-009 retained_intron Homo_sapiens 0 267
ENST00000491806 KCNT1-004 protein_coding Homo_sapiens 0 878

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